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Tools for Sanger Sequencing Data in R. This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms.
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This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms.
sangeranalseR is an R package that provides fast, flexible, and reproducible workflows for assembling your sanger seuqencing data into contigs. It adds to a list of already widely-used tools, like Geneious , CodonCode Aligner and Phred-Phrap-Consed ;.
Advanced User Guide - SangerAlignment (AB1)¶ SangerAlignment is in the toppest level of sangeranalyseR ( Figure_1 ), and each SangerAlignment instance corresponds to an alignment of contigs in a Sanger sequencing experiment.
Bioconductor version: 3.16. This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms. Author: Jonathon T. Hill, Bradley Demarest. Maintainer: Jonathon Hill <jhill at byu.edu>.
16 févr. 2021 · sangeranalyseR is feature-rich, free, and open-source R package for processing Sanger sequencing data. It allows users to go from loading reads to saving aligned contigs in a few lines of R code by using sensible defaults for most actions.
